Reaver ninja'd me while I was writing this.
I think Cyberpirates was technically a 2E product because it came out in 1997 under FASA. 3E launched in 1998 under WizKids.
Aside from that technicality, Cyberpirates has a ton of information about pirate campaigns. It focuses on the Caribbean, the Philippines, and the Ivory Coast. It has gear and watercraft relevant to campaigns in those settings. I used it when I had my runners hop through Jamaica on their way to Aztlan.
That said, it does not have a pre-built adventure. It has lots of plot hooks, but not actual runs. Still, it's where I would start for things related to maritime activity.