...I also received a definitive answer from my missions group. So at least that isn't hosed.
However, not pleased that she paid 14,000¥/6 K for what effectively becomes a 1,000¥ mundane Katana and her 2 Qi foci are each just pretty 6,000¥ tattoos (especially as I chose resources over metatype).
Did some messing around and rebuilt her as a Bio-Adept (4 magic 2.65 essence in bio and a smartlink), but the most cost effective way to do so is to use the Karma build as it is easier to balance everything out without taking a huge hit assigning a low priority to something important. Did have to purchase the Adept quality (rather than get it free under the priority system).
Basically I had 168,000¥ in resources, the attributes and skills came out pretty much the same (in a couple cases better with augmentation). The only Adept powers she has are Improved Reflexes 2 and Combat sense 3. No Foci to start with.
The augmentations were:
Smartlink, with Vision Magnification
Muscle Augmentation 1
Muscle Toner 2
Orthoskin 3 (total 19 armour)
Tetrachromatic Vision (+3 to visual perception and reduce darkness penalties by one level).
Gave her the same weapons and armour (though the Jacket has YNT softweave)
Attributes: BOD: 4, AGI: 5 (7), REA: 4 (6), STR: 4 (5), CHA: 2, INT: 5, LOG: 2, WIL: 5, EDG: 3, MAG: 4, ESS: 4.35
Initiative 9 (11) + 3d6.
Limits - Physical: 7, Mental: 5 (7 Visual Perception), Social: 5.
Positive Qualities:
Adept
Agile Defender
Natural Athlete
Perceptive I
Negative Qualities:
Addiction (Mild - Betel)
Albinisim II
Distinctive Style
Prejudiced (Common Biased - Elves)
SkIlls
Blades (Swords): 6 - Pool: 13 (15)
Etiquette: 2 - Pool: 4
Longarms (Sniper Rifles) 5 - Pool: 12 (14)
Perception: 5 - Pool: 11 (14/16 visual)
Pistols (Revolvers) 5 - Pool: 12 (14)
Sneaking: (Urban) 5 - Pool: 12 (14)
Knowledge:
Area Knowledge Chicago 3 - Pool: 8
Gangs: 4 - Pool: 9
Tir Taringire 3 - Pool: 8
English 4 - Pool: 8 (apparently no "native" language under the Karma system)
Japanese: 3 - Pool: 8
Sperethieil: 2 - Pool: 7
Skill Group: Athletics 3
Gymnastics Pool: 12
Running Pool: 10
Swimming Pool: 8
Martial Art: Carramoleg - Technique: Iajutsu (yeah thought it would be interesting for the "Forsaken Daughter" of the TT to learn it's fighting style)
Unfortunately from what I read in the Missions FAQ (and I have the latest update, also searched the missions forum here) apparently only the Priority chargen system is being used. Interesting experiment though.